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Rubus creticus Root Extract and Its Active Fraction Reduce Calcium Oxalate Crystallization: An Antiurolithic-Guided Fractionation and In Silico ADMET Studies

dc.contributor.authorOylumlu, Deniz
dc.contributor.authorSen, Ali
dc.contributor.authorServi, Huseyin
dc.contributor.authorBarak, Timur Hakan
dc.contributor.authorSekerler, Turgut
dc.contributor.authorDogan, Ahmet
dc.date.accessioned2026-11-05T11:00:23Z
dc.date.issued2026
dc.description.abstractThis study aimed to evaluate the anti-urolithiatic activities of Rubus creticus Tourn. ex L., Rosaceae, ethanol extract and its hexane, chloroform, ethyl acetate, and water fractions from the R. creticus root used as a kidney stone reducer in traditional medicine, and to reveal their effective compounds by phytochemical analysis. Anti-urolithiatic activity was investigated by calcium oxalate inhibition. Phytochemical content of active samples was investigated by GC-MS. Bioactivity-guided fractionation process was performed on the active Rubus chloroform extract using chromatographic methods. The in silico ADMET study was performed to predict the pharmacokinetic profile. Rubus chloroform extract exhibited a stronger anti-urolithiatic activity with an IC50 value of 9.94 & micro;g/ml compared to standard Cystone (R) (59.07 & micro;g/ml). It was revealed that the Rubus chloroform extract, which exhibited the best anti-urolithiatic activity, contained ethyl oleate, dehydroabietic acid, abietic acid, and hexadecanoic acid ethyl ester. It was observed that the isolate obtained as a single band in pTLC with anti-urolithiasis guidance from Rubus chloroform extract was a rich mixture of diterpene compounds (isopimaric acid, abietic acid, pimaric acid, kaur-16-en-19-al, and dehydroabietic acid) and this isolate (4.09 & micro;g/ml) also had significant activity. In silico ADMET evaluation of the diterpenes revealed high gastrointestinal absorption and favorable permeability. The results showed that Rubus chloroform extract exhibited strong anti-urolithiatic activity, likely due to its diterpenes and other contributing secondary metabolites. The findings suggest a scientific basis for the ethnobotanical use of the plant, showing that it may serve as a prospective candidate for developing natural remedies against kidney stone disease. However, in vivo studies are necessary to fully validate its efficacy.
dc.description.issue1
dc.description.pages75
dc.description.sponsorshipThis study was supported by Marmara University Scientific Research Projects Coordination Unit within the scope of the project numbered TYL-2024-11185.
dc.description.volume36
dc.identifier.doi10.1007/s43450-026-00789-2
dc.identifier.issn0102-695X
dc.identifier.issn1981-528X
dc.identifier.urihttps://doi.org/10.1007/s43450-026-00789-2
dc.identifier.urihttps://openaccess.acibadem.edu.tr/handle/11443/10413
dc.identifier.wosWOS:001833768700001
dc.language.isoen
dc.publisherSPRINGERNATURE
dc.relation.fundingMarmara niversitesi
dc.relation.fundingMarmara niversitesi [TYL-2024-11185]
dc.relation.hasversion10.1007/s43450-026-00789-2
dc.relation.ispartofREVISTA BRASILEIRA DE FARMACOGNOSIA-BRAZILIAN JOURNAL OF PHARMACOGNOSY
dc.subjectCalcium oxalate crystals
dc.subjectIn vitro activity
dc.subjectMedicinal plant
dc.subjectNatural compounds
dc.subjectKidney stone disease
dc.subjectChemistry, Medicinal
dc.subjectPharmacology & Pharmacy
dc.titleRubus creticus Root Extract and Its Active Fraction Reduce Calcium Oxalate Crystallization: An Antiurolithic-Guided Fractionation and In Silico ADMET Studies
dc.typeArticle
oaire.citation.editionScience Citation Index Expanded (SCI-EXPANDED)
oaire.citation.issue1
oaire.citation.volume36
person.identifier.ridJCO-3356-2023
person.identifier.ridAAB-8855-2022
person.identifier.ridC-1547-2015
person.identifier.ridHZI-1758-2023
person.identifier.ridAAC-2862-2019

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