Browsing by Author "Konu, Ozlen"

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    mESAdb: microRNA Expression and Sequence Analysis Database
    (OXFORD UNIV PRESS, 2011-01-01) Kaya, Koray D.; Karakulah, Gokhan; Yakicier, Cengiz M.; Acar, Aybar C.; Konu, Ozlen
    microRNA expression and sequence analysis database (http://konulab.fen.bilkent.edu.tr/mirna/) (mESAdb) is a regularly updated database for the multivariate analysis of sequences and expression of microRNAs from multiple taxa. mESAdb is modular and has a user interface implemented in PHP and JavaScript and coupled with statistical analysis and visualization packages written for the R language. The database primarily comprises mature microRNA sequences and their target data, along with selected human, mouse and zebrafish expression data sets. mESAdb analysis modules allow (i) mining of microRNA expression data sets for subsets of microRNAs selected manually or by motif